Targeted sequencing of Vatairea macrocarpa - SRA

SRX22463425: Targeted sequencing of Vatairea macrocarpa
1 ILLUMINA (Illumina HiSeq 3000) run: 110,603 spots, 33.2M bases, 14.9Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 6

PRJNA1022025 • SRP471042 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Vatairea macrocarpa

SAMN37580884 • SRS19477421 • All experiments • All runs

Organism: Vatairea macrocarpa

Library:

Name: 2f5434f7-ec9e-4cc7-b7b4-bc7c4237bd10

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 110,603 spots, 33.2M bases, 14.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR26764690	110,603	33.2M	14.9Mb	2023-11-09

ID:: 30449214

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity